Files in jeremymcrae/publishedDeNovos
Published De Novos Dataset from Developmental Disorder Sequencing Studies
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/data.R
R/ensembl_rest.R
R/fix_alleles.R
R/get_autism_de_novos.R
R/get_de_ligt_de_novos.R
R/get_de_rubeis_de_novos.R
R/get_epi4k_de_novos.R
R/get_fromer_de_novos.R
R/get_gilissen_de_novos.R
R/get_iossifov_nature_de_novos.R
R/get_iossifov_neuron_de_novos.R
R/get_lelieveld_de_novos.R
R/get_oroak_de_novos.R
R/get_rauch_de_novos.R
R/get_sanders_de_novos.R
R/get_zaiidi_de_novos.R
R/remove_duplicates.R
R/variant_cleaning.R
README.md
data-raw/cohorts.tsv
data-raw/prepare_cohort_info.R
data-raw/prepare_de_novo_datasets.R
data-raw/variants.txt.gz
data/cohorts.rda
data/variants.rda
man/autism_de_novos.Rd
man/cohorts.Rd
man/de_rubeis_de_novos.Rd
man/deligt_de_novos.Rd
man/epi4k_de_novos.Rd
man/find_matching_sites.Rd
man/find_most_severe_transcript.Rd
man/fix_coordinates.Rd
man/fix_coordinates_with_allele.Rd
man/fix_coordinates_with_hgvs_genomic.Rd
man/fix_del_alleles.Rd
man/fix_dup_alleles.Rd
man/fix_het_alleles.Rd
man/fix_ins_alleles.Rd
man/fix_sub_alleles.Rd
man/fix_zaiidi_coordinates.Rd
man/fromer_de_novos.Rd
man/get_deligt_denovo_table.Rd
man/get_deligt_sex.Rd
man/get_deligt_text.Rd
man/get_gene_id_for_variant.Rd
man/get_protein_length.Rd
man/get_sequence_in_region.Rd
man/get_vep_consequence.Rd
man/gilissen_de_novos.Rd
man/iossifov_nature_de_novos.Rd
man/iossifov_neuron_de_novos.Rd
man/lelieveld_de_novos.Rd
man/map_coordinates.Rd
man/oroak_de_novos.Rd
man/rauch_de_novos.Rd
man/remove_duplicates.Rd
man/request_from_ensembl.Rd
man/sanders_de_novos.Rd
man/variants.Rd
man/zaidi_de_novos.Rd
