compensation: Compensate the coverage with GC-content or mappability
In jianhong/InPAS: Identify Novel Alternative PolyAdenylation Sites (PAS) from RNA-seq data
View source: R/10.get_UTR3TotalCov.R
compensation R Documentation
Compensate the coverage with GC-content or mappability
Description
Compensate the coverage with GC-content or mappability
Usage
compensation(view, comp, start, end)
Arguments
view
A list of view object
comp
A numeric vector of weight for GC composition or mappability
start
An integer vector, starting coordinates
end
An integer vector, end coordinates
Value
a list of GC composition or mappability corrected coverage
Author(s)
Jianhong Ou
jianhong/InPAS documentation built on Nov. 5, 2024, 7:45 a.m.
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View source: R/10.get_UTR3TotalCov.R
| compensation | R Documentation |
Compensate the coverage with GC-content or mappability
Description
Compensate the coverage with GC-content or mappability
Usage
compensation(view, comp, start, end)
Arguments
view |
A list of view object |
comp |
A numeric vector of weight for GC composition or mappability |
start |
An integer vector, starting coordinates |
end |
An integer vector, end coordinates |
Value
a list of GC composition or mappability corrected coverage
Author(s)
Jianhong Ou
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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