coverageGR: calculate coverage
In jianhong/trackViewer: A R/Bioconductor package with web interface for drawing elegant interactive tracks or lollipop plot to facilitate integrated analysis of multi-omics data
coverageGR R Documentation
calculate coverage
Description
calculate coverage for GRanges,
GAlignments or
GAlignmentPairs
Usage
coverageGR(gr)
Arguments
gr
an object of RGanges, GAlignments or GAlignmentPairs
Value
an object of GRanges
See Also
See Also as coverage,
coverage-methods
Examples
bed <- system.file("extdata", "fox2.bed", package="trackViewer",
mustWork=TRUE)
fox2 <- importScore(bed)
fox2$dat <- coverageGR(fox2$dat)
jianhong/trackViewer documentation built on March 17, 2024, 2:16 p.m.
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| coverageGR | R Documentation |
calculate coverage
Description
calculate coverage for GRanges,
GAlignments or
GAlignmentPairs
Usage
coverageGR(gr)
Arguments
gr |
an object of RGanges, GAlignments or GAlignmentPairs |
Value
an object of GRanges
See Also
See Also as coverage,
coverage-methods
Examples
bed <- system.file("extdata", "fox2.bed", package="trackViewer",
mustWork=TRUE)
fox2 <- importScore(bed)
fox2$dat <- coverageGR(fox2$dat)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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