loadIdeogram: load ideogram from UCSC

In jianhong/trackViewer: A R/Bioconductor package with web interface for drawing elegant interactive tracks or lollipop plot to facilitate integrated analysis of multi-omics data

load ideogram from UCSC

Description

Download ideogram table from UCSC

Usage

loadIdeogram(genome, chrom = NULL, ranges = NULL, ...)

Arguments

genome	Assembly name assigned by UCSC, such as hg38, mm10.
chrom	A character vector of chromosome names, or NULL.
ranges	A Ranges object with the intervals.
...	Additional arguments to pass to the GRanges constructor.

Value

A GRanges object.

See Also

See Also as ideogramPlot

Examples

## Not run: 
head(loadIdeogram("hg38", chrom = "chr1"))

## End(Not run)

jianhong/trackViewer documentation built on Nov. 10, 2024, 10:33 a.m.