h5_ica: Custom ICA function for analyzing gene expression data.

Description Usage Arguments Value

Description

Performing ICA on a dataset and create a list object with results.

Usage

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h5_ica(h5_file = NULL, input_pheno = NULL, k.est = NULL,
  scale.pheno = FALSE, var.cutoff = 99)

Arguments

h5_file

Name of HDF5 file that has the phenotype values saved.

input_pheno

Phenotype matrix with diemnsions N x g

k.est

Number of components to be estimated or method to estimate it.

scale.pheno

Logical value specifying the scaling of row of the phenotype.mx.

Value

List with the following entries.


jinhyunju/icreport documentation built on May 19, 2019, 10:35 a.m.