ica_covar_check: Custom ICA function for analyzing gene expression data.
In jinhyunju/icreport: Tools for creating a visual summary of matrix decomposition results.
Description
Usage
Arguments
Value
Description
Performing ICA on a dataset and create a list object with results.
Usage
1
2
ica_covar_check(ica_list = NULL, h5_file = NULL, covars = NULL,
cor.threshold = 0.05)
Arguments
h5_file
Name of HDF5 file that has the phenotype values saved.
input_pheno
Phenotype matrix with diemnsions N x g
k.est
Number of components to be estimated or method to estimate it.
scale.pheno
Logical value specifying the scaling of row of the phenotype.mx.
Value
List with the following entries.
jinhyunju/icreport documentation built on May 19, 2019, 10:35 a.m.
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Description Usage Arguments Value
Description
Performing ICA on a dataset and create a list object with results.
Usage
1 2 | ica_covar_check(ica_list = NULL, h5_file = NULL, covars = NULL,
cor.threshold = 0.05)
|
Arguments
h5_file |
Name of HDF5 file that has the phenotype values saved. |
input_pheno |
Phenotype matrix with diemnsions N x g |
k.est |
Number of components to be estimated or method to estimate it. |
scale.pheno |
Logical value specifying the scaling of row of the phenotype.mx. |
Value
List with the following entries.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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