h5_add_data: Adding data to a given hdf5 file

Description Usage Arguments Value

Description

Use in-memory objects to create phenotypes, genotypes and covariate datasets in a given hdf5 file

Usage

1
2
h5_add_data(file_name = NULL, input_matrix = NULL, feature_ids = NULL,
  sample_ids = NULL, data_type = c("phenotypes", "genotypes", "covars"))

Arguments

file_name

Name of the HDF5 file to add the information to

feature_ids

Unique phenotype ids

sample_ids

Unique sample ids

phenotypes

Phenotype matrix to save

Value

Saves the given objects into the hdf5 generated by the create_eqtl_input_h5() function.


jinhyunju/icreport documentation built on May 19, 2019, 10:35 a.m.