jacmap | R Documentation |
Convert a list to a jaccard matrix and plot with 'scalop::gmap'
jacmap(
L = NULL,
L2 = NULL,
m = NULL,
ratio = 1,
limits = c(0, 1),
tile.col = "black",
tile.size = 0.1,
cols = c("white", "darkred"),
num = FALSE,
angle = T,
...,
tiletext = FALSE,
dcp = 1
)
L |
list of character vectors to compute jaccard indexes between. |
ratio |
aspect ratio. Default: 1 |
limits |
colour key limits. Default: c(0, 1) |
tile.col |
draw lines between tiles. Default: 'black' |
tile.size |
draw lines between tiles. Default: 0.1 |
cols |
colours for key. Default: c("white", "darkred") |
num |
numeric (TRUE) or character (FALSE) x- and y- axes labels. Default: FALSE |
angle |
angle x-axis labels. Default: T |
... |
other arguments passed to 'scalop::gmap' |
tiletext |
write jaccard indexes on tiles? Default: FALSE |
dcp |
relevant if tiletext is TRUE. How many decimal places to show? Default: 1 |
ggplot object
melt
geom_label
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