msigdb: FUNCTION_TITLE

In jlaffy/scalop: Single Cell Analysis Operations

FUNCTION_TITLE

Description

FUNCTION_DESCRIPTION

Usage

msigdb(
  category = c("H", "C2", "C5"),
  subcategory = NULL,
  exclude.subcategory = "HPO",
  split.by.subcategory = F,
  species = "Homo sapiens",
  annotation = c("gene_symbol", "entrez_gene"),
  return.dataframe = F
)

Arguments

category	PARAM_DESCRIPTION, Default: c("H", "C2", "C5")
subcategory	PARAM_DESCRIPTION, Default: NULL
exclude.subcategory	PARAM_DESCRIPTION, Default: 'HPO'
split.by.subcategory	PARAM_DESCRIPTION, Default: F
species	PARAM_DESCRIPTION, Default: 'Homo sapiens'
annotation	PARAM_DESCRIPTION, Default: c("gene_symbol", "entrez_gene")
return.dataframe	PARAM_DESCRIPTION, Default: F

Details

DETAILS

Value

OUTPUT_DESCRIPTION

See Also

msigdbr filter

Examples

## Not run: 
if(interactive()){
 #EXAMPLE1
 }

## End(Not run)

jlaffy/scalop documentation built on March 24, 2024, 9 a.m.