Files in jmonlong/sQTLseekeR
Splicing QTL discovery tool

.gitignore
DESCRIPTION
Data/genes.bed
Data/sQTLs-FDR10-CEU.tsv.gz
Data/sQTLs-FDR10-FIN.tsv.gz
Data/sQTLs-FDR10-GBR.tsv.gz
Data/sQTLs-FDR10-TSI.tsv.gz
Data/sQTLs-FDR10-YRI.tsv.gz
Data/snps-012coded.tsv
Data/transExpression.tsv.gz
NAMESPACE
R/adonis.comp.R R/classify.events.R R/compFscore.R R/compPvalue.R R/compute.null.R R/hellingerDist.R R/index.genotype.R R/md.trans.R R/nbDiffPt.R R/permutest.betadisper.R R/prepare.trans.exp.R R/read.bedix.R R/relativize.R R/sqtl.seeker.R R/sqtls.R R/te.dispersion.R README.md TODO.md docs/README.md docs/SplicingEventClassification.Rmd docs/SplicingEventClassification.md
docs/SplicingEventClassification_files/figure-markdown_github/unnamed-chunk-11-1.png
docs/SplicingEventClassification_files/figure-markdown_github/unnamed-chunk-7-1.png
docs/SplicingEventClassification_files/figure-markdown_github/unnamed-chunk-8-1.png
docs/splicingEventsClassification.png
install.R installOnR.3.1.R man/adonis.comp.Rd man/classify.events.Rd man/compFscore.Rd man/compPvalue.Rd man/compute.null.Rd man/hellingerDist.Rd man/index.genotype.Rd man/md.trans.Rd man/nbDiffPt.Rd man/permutest.betadisper.Rd man/prepare.trans.exp.Rd man/read.bedix.Rd man/relativize.Rd man/sQTLseekeR-package.Rd man/sqtl.seeker.Rd man/sqtls.Rd man/te.dispersion.Rd scripts/.BatchJobs.R scripts/benchmark-sQTLseekeR.R
scripts/cluster.tmpl
scripts/makeClusterFunctionsAdaptive.R scripts/run-example-BatchJobs-manySNPs.R scripts/run-example-BatchJobs.R
scripts/run-example-preproc.sh
scripts/run-example.R tests/testthat.R tests/testthat/test-Fcomp.R tests/testthat/test-PVcomp.R tests/testthat/test-indexGeno.R tests/testthat/test-prepareTE.R tests/testthat/test-sqtlseeker.R
jmonlong/sQTLseekeR documentation built on May 18, 2017, 2:38 a.m.