md.trans: MaxDiff splicing ratios computation
In jmonlong/sQTLseekeR: Splicing QTL discovery tool
Description
Usage
Arguments
Value
Author(s)
Description
Compute the maximum difference in transcript relative expression
between genotype groups.
Usage
1
md.trans(sr.o, groups.o, samples)
Arguments
sr.o
a matrix or data.frame with the transcript relative expression.
groups.o
a factor with the genotype groups for each sample.
samples
a vector with the names of samples used in the genotype
groups information.
Value
a list with:
md
the maximum difference in splicing ratios between genotype groups.
tr.first, tr.second
the two transcripts that change the most.
Author(s)
Jean Monlong
jmonlong/sQTLseekeR documentation built on May 19, 2019, 1:54 p.m.
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Description Usage Arguments Value Author(s)
Description
Compute the maximum difference in transcript relative expression between genotype groups.
Usage
1 | md.trans(sr.o, groups.o, samples)
|
Arguments
sr.o |
a matrix or data.frame with the transcript relative expression. |
groups.o |
a factor with the genotype groups for each sample. |
samples |
a vector with the names of samples used in the genotype groups information. |
Value
a list with:
md |
the maximum difference in splicing ratios between genotype groups. |
tr.first, tr.second |
the two transcripts that change the most. |
Author(s)
Jean Monlong
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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