Description Usage Arguments Value Author(s)
Compute P-values from F scores.
1 2 | compPvalue(res.df, tre.dist, min.nb.ext.scores = 1000, nb.perm.max = 1e+06,
svQTL = FALSE, approx = TRUE)
|
res.df |
a data.frame with the F scores and number of groups. |
tre.dist |
the distance object of the transcript relative expression. |
min.nb.ext.scores |
the minimum number of permuted score higher than 'F.lead' to allow the computation to stop. Default is 1000. |
nb.perm.max |
the maximum number of permutations. Default is 1e6. |
svQTL |
should svQTL test be performed instead of sQTL. Default is FALSE. |
approx |
should the asymptotic distribution be used instead of permutations. Default is TRUE. |
an updated data.frame with new columns 'pv' and 'nb.perms'.
Jean Monlong
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.