adonis.comp: Compute single F score

In jmonlong/sQTLseekeR: Splicing QTL discovery tool

Description

Compute F score using the vegan package.

Usage

adonis.comp(dis, groups, permutations = 99, f.perms = FALSE,
  svQTL = FALSE, approx = TRUE)

Arguments

dis	the distance object of the transcript relative expression.
groups	a factor with the group information.
permutations	the number of permutations.
f.perms	should the permuted F scores be returned instead of the real F score. Default is FALSE.
svQTL	should svQTL test be performed instead of sQTL. Default is FALSE.
approx	should the asymptotic distribution be used instead of permutations. Default is TRUE.

Value

a vector with the F score or the permuted F scores.

Author(s)

Jean Monlong

jmonlong/sQTLseekeR documentation built on May 19, 2019, 1:54 p.m.