Description Usage Arguments Value Author(s)
Compute the F score, max diff ratio difference.
1 | compFscore(geno.df, tre.dist, tre.df, svQTL = FALSE)
|
geno.df |
a data.frame of one row with the genotype information for each sample. |
tre.dist |
a distance object from the transcript relative expression. |
tre.df |
a data.frame with the transcript relative expression. |
svQTL |
should svQTL test be performed in addition to sQTL. Default is FALSE. |
a data.frame with columns:
F |
the F score. |
nb.groups |
the number of groups created by the genotypes. |
md |
the maximum difference in splicing ratios between genotype groups. |
tr.first, tr.second |
the two transcripts that change the most. |
Jean Monlong
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