btESBL_ecoli_globalst410_tree: Data: E. coli ST410 global phylogeny
In joelewis101/blantyreESBL: Data and Code Repository For a Study Describing Antimicrobial Resistance in Blantyre, Malawi
btESBL_ecoli_globalst410_tree R Documentation
Data: E. coli ST410 global phylogeny
Description
Midpoint rooted maximum likelihood phylogeny for E. coli
incorporating all ST410 study isolates 327 ST410 context genomes
from Feng et al 2019 (doi:10.1038/s42003-019-0569-1) using multiple
sequence alignment from mapping to reference.
(see manuscript for details)
Usage
btESBL_ecoli_globalst410_tree
Format
A "phylo" object ("ape" package)
joelewis101/blantyreESBL documentation built on Nov. 1, 2023, 1:43 p.m.
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| btESBL_ecoli_globalst410_tree | R Documentation |
Data: E. coli ST410 global phylogeny
Description
Midpoint rooted maximum likelihood phylogeny for E. coli incorporating all ST410 study isolates 327 ST410 context genomes from Feng et al 2019 (doi:10.1038/s42003-019-0569-1) using multiple sequence alignment from mapping to reference. (see manuscript for details)
Usage
btESBL_ecoli_globalst410_tree
Format
A "phylo" object ("ape" package)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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