btESBL_ecoli_st131_metadata: Data: metadata of global E. coli ST131 isolates
In joelewis101/blantyreESBL: Data and Code Repository For a Study Describing Antimicrobial Resistance in Blantyre, Malawi
btESBL_ecoli_st131_metadata R Documentation
Data: metadata of global E. coli ST131 isolates
Description
Metadata of a collection of 918 E. coli ST131 genomes
including 855 from a study of global E. coli ST131
(Mcnally et at 2019 https://doi.org/10.1128/mBio.00644-19)
and the remainder sequenced as part of this study
Usage
btESBL_ecoli_st131_metadata
Format
A dataframe with 918 rows and 4 variables
- Accession_number
Unique sample-sequencing run ID or accession
- Year
Year of sample collection
- Country
Country of sample collection
- clade
ST131 clade as defined in Mcnally et al
joelewis101/blantyreESBL documentation built on Nov. 1, 2023, 1:43 p.m.
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| btESBL_ecoli_st131_metadata | R Documentation |
Data: metadata of global E. coli ST131 isolates
Description
Metadata of a collection of 918 E. coli ST131 genomes including 855 from a study of global E. coli ST131 (Mcnally et at 2019 https://doi.org/10.1128/mBio.00644-19) and the remainder sequenced as part of this study
Usage
btESBL_ecoli_st131_metadata
Format
A dataframe with 918 rows and 4 variables
- Accession_number
Unique sample-sequencing run ID or accession
- Year
Year of sample collection
- Country
Country of sample collection
- clade
ST131 clade as defined in Mcnally et al
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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