availableOntologies-GreatJob-method: All available ontology names of the GREAT job

In jokergoo/rGREAT: GREAT Analysis - Functional Enrichment on Genomic Regions

All available ontology names of the GREAT job

Description

All available ontology names of the GREAT job

Usage

## S4 method for signature 'GreatJob'
availableOntologies(object, category = NULL)

Arguments

object	A GreatJob-class object returned by submitGreatJob.
category	one or multiple categories. All available categories can be got by availableCategories.

Details

The values of the supported ontologies sometime change. You should run the function to get the real-time values. The meaning of ontology returned is quite self-explained by the name.

Value

The returned values is a vector of ontologies.

Author(s)

Zuguang gu <[e-mail]>

Examples

job = readRDS(system.file("extdata", "GreatJob.rds", package = "rGREAT"))
availableOntologies(job)

jokergoo/rGREAT documentation built on March 28, 2024, 5:31 a.m.