ref_bkg_genome: Trinucleotide counts in the human genome

Description Usage References

Description

Data frame with the human genome (hg19) counts corresponding to the 96 single-nucleotide-substitution trinucleotide contexts (adapted from package deconstructSigs by Rosenthal et al.). It is used by the sig.bkg.adj argument in mutSigMapper.

Usage

1

References

Rosenthal R et al. DeconstructSigs: delineating mutational processes in single tumors distinguishes DNA repair deficiencies and patterns of carcinoma evolution, Genome Biol. 17, 31 (2016).


juliancandia/mutSigMapper documentation built on Oct. 19, 2020, 3:58 a.m.