export: generates plain text files from mutSigMapper object

In juliancandia/mutSigMapper: Mapping Spectra to Mutational Signatures Based on Shot-Noise Modeling

Description

This function enables the extraction of data from a mutSigMapper object. Plain text data files are produced with tab- or comma-separated-value formats.

Usage

export(x, dest_dir=getwd(), dest_dir_create=TRUE, delim=c("tsv","csv"), 
input.data=TRUE)

Arguments

x	mutSigMapper object.
dest_dir	Destination directory. Default is the working directory.
dest_dir_create	Creates destination directory if it does not exist already. Default is TRUE.
delim	Delimiter for the generated files, either tab-separated ("tsv") or comma-separated ("csv") values. Default is "tsv".
input.data	Logical variable indicating whether to generate files for the input signature and spectra data frames. Default is TRUE.

Value

None.

Author(s)

Julian Candia
Maintainer: Julian Candia [e-mail]

See Also

mutSigMapper

Examples

data(spectra)
map = mutSigMapper(spectra)
export(x=map,dest_dir=tempdir())

juliancandia/mutSigMapper documentation built on Oct. 19, 2020, 3:58 a.m.