Files in julianstanley/SensorOverlord
A Tyrant of Absolute Quantitative Ratiometric Microscopy

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/Sensor_Classes.R R/Sensor_Constructors.R R/Sensor_Methods.R R/Spectra_Class.R R/Spectra_Constructors.R R/Spectra_Methods.R R/extra/error_table_from_params.R R/extra/error_table_from_spectra.R R/extra/helpers_scratch.R R/launchApp.R R/utils.R README.md
_pkgdown.yml
docs/404.html
docs/LICENSE-text.html
docs/articles/SensorOverlord_Walkthrough.html
docs/articles/SensorOverlord_Walkthrough_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/SensorOverlord_Walkthrough_files/figure-html/unnamed-chunk-11-1.png
docs/articles/SensorOverlord_Walkthrough_files/figure-html/unnamed-chunk-13-1.png
docs/articles/SensorOverlord_Walkthrough_files/figure-html/unnamed-chunk-14-1.png
docs/articles/SensorOverlord_Walkthrough_files/header-attrs-2.3/header-attrs.js
docs/articles/accessing-and-manipulating-the-database.html
docs/articles/accessing-database.html
docs/articles/accessing-database_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/accessing-database_files/header-attrs-2.3/header-attrs.js
docs/articles/adding_to_db.html
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/E.html
docs/reference/Error_E.html
docs/reference/Error_general.html
docs/reference/Error_pH.html
docs/reference/Error_pLigand.html
docs/reference/R_of_E.html
docs/reference/R_of_pH.html
docs/reference/R_of_pLigand.html
docs/reference/Sensor-class.html
docs/reference/adjustSpectra.html
docs/reference/create_error_df_general.html
docs/reference/create_error_df_pH.html
docs/reference/create_error_df_pH_multiple.html
docs/reference/create_error_df_pLigand.html
docs/reference/create_error_df_pLigand_multiple.html
docs/reference/create_error_df_redox.html
docs/reference/create_error_df_redox_multiple.html
docs/reference/create_ranges_multiple.html
docs/reference/error_df-ligandSensor-method.html
docs/reference/error_df-pHSensor-method.html
docs/reference/error_df-redoxSensor-method.html
docs/reference/error_df.html
docs/reference/formatSpectraData.html
docs/reference/fraction_deprot.html
docs/reference/getAbsError-R-redoxSensor-method.html
docs/reference/getAbsError-R-redoxSensor.html
docs/reference/getAbsError-R.html
docs/reference/getAbsError-Sensor-method.html
docs/reference/getAbsError-sensor.html
docs/reference/getAbsError.html
docs/reference/getDb.html
docs/reference/getE-redoxSensor-method.html
docs/reference/getE-redoxSensor.html
docs/reference/getE.html
docs/reference/getE_deriv-redoxSensor-method.html
docs/reference/getE_deriv-redoxSensor.html
docs/reference/getE_deriv.html
docs/reference/getErrorTable-Sensor-method.html
docs/reference/getErrorTable-sensor.html
docs/reference/getErrorTable.html
docs/reference/getFractionMax-Sensor-method.html
docs/reference/getFractionMax-methods.html
docs/reference/getFractionMax.html
docs/reference/getProperty-Sensor-method.html
docs/reference/getProperty-methods.html
docs/reference/getProperty-pHSensor-method.html
docs/reference/getProperty-pHSensor.html
docs/reference/getProperty-redoxSensor-method.html
docs/reference/getProperty-redoxSensor.html
docs/reference/getProperty.html
docs/reference/getR-Sensor-method.html
docs/reference/getR.html
docs/reference/getpH-pHSensor-method.html
docs/reference/getpH-pHSensor.html
docs/reference/getpH.html
docs/reference/index.html
docs/reference/launchApp.html
docs/reference/ligandSensor-class.html
docs/reference/newSensorFromSpectra-function.html
docs/reference/pH.html
docs/reference/pHSensor-class.html
docs/reference/pLigand.html
docs/reference/plotFractionMax-Sensor-method.html
docs/reference/plotFractionMax-Sensor.html
docs/reference/plotFractionMax-pHSensor-method.html
docs/reference/plotFractionMax-pHSensor.html
docs/reference/plotFractionMax-redoxSensor-method.html
docs/reference/plotFractionMax-redoxSensor.html
docs/reference/plotFractionMax.html
docs/reference/plotProperty-Sensor-method.html
docs/reference/plotProperty-Sensor.html
docs/reference/plotProperty-pHSensor-method.html
docs/reference/plotProperty-pHSensor.html
docs/reference/plotProperty-redoxSensor-method.html
docs/reference/plotProperty-redoxSensor.html
docs/reference/plotProperty.html
docs/reference/plotSpectra-generic.html
docs/reference/plotSpectra-sensorSpectra-method.html
docs/reference/plotSpectra-sensorSpectra.html
docs/reference/plot_ranges_general.html
docs/reference/plot_ranges_pH-1.png
docs/reference/plot_ranges_pH.html
docs/reference/plot_ranges_pLigand-1.png
docs/reference/plot_ranges_pLigand.html
docs/reference/plot_ranges_redox-1.png
docs/reference/plot_ranges_redox.html
docs/reference/rangePlot-ligandSensor-method-1.png
docs/reference/rangePlot-ligandSensor-method.html
docs/reference/rangePlot-pHSensor-method-1.png
docs/reference/rangePlot-pHSensor-method.html
docs/reference/rangePlot-redoxSensor-method-1.png
docs/reference/rangePlot-redoxSensor-method.html
docs/reference/rangePlot.html
docs/reference/ranges_df-ligandSensor-method.html
docs/reference/ranges_df-pHSensor-method.html
docs/reference/ranges_df-redoxSensor-method.html
docs/reference/ranges_df.html
docs/reference/reScaleToRange-function.html
docs/reference/redoxSensor-class.html
docs/reference/sensorOverlordApp.html
docs/reference/sensorSpectra-class.html
docs/reference/spectraMatrixFromValues-function.html
inst/shinyApp/app.R
inst/shinyApp/rsconnect/shinyapps.io/julianstanley/SensorOverlordProduction.dcf
inst/shinyApp/server/server_01_welcome.R inst/shinyApp/server/server_02_custom.R inst/shinyApp/ui/ui_01_welcome.R inst/shinyApp/ui/ui_02_analysis.R inst/shinyApp/ui/ui_02_customSensor.R inst/shinyApp/ui/ui_03_more.R inst/shinyApp/ui/ui_04_settings.R inst/shinyApp/utils/helpers.R
inst/shinyApp/www/bootstrap.min.css
inst/shinyApp/www/footer.html
inst/shinyApp/www/instructions.html
inst/shinyApp/www/more_info.html
inst/shinyApp/www/neulogo.jpeg
inst/shinyApp/www/purpose.html
man/E.Rd man/Error_E.Rd man/Error_general.Rd man/Error_pH.Rd man/Error_pLigand.Rd man/R_of_E.Rd man/R_of_pH.Rd man/R_of_pLigand.Rd man/Sensor-class.Rd man/adjustSpectra.Rd man/create_error_df_general.Rd man/create_error_df_pH.Rd man/create_error_df_pH_multiple.Rd man/create_error_df_pLigand.Rd man/create_error_df_pLigand_multiple.Rd man/create_error_df_redox.Rd man/create_error_df_redox_multiple.Rd man/create_ranges_multiple.Rd man/error_df-ligandSensor-method.Rd man/error_df-pHSensor-method.Rd man/error_df-redoxSensor-method.Rd man/formatSpectraData.Rd man/fraction_deprot.Rd man/getAbsError-R-redoxSensor-method.Rd man/getAbsError-Sensor-method.Rd man/getDb.Rd man/getE-redoxSensor-method.Rd man/getE_deriv-redoxSensor-method.Rd man/getErrorTable-Sensor-method.Rd man/getFractionMax-Sensor-method.Rd man/getProperty-Sensor-method.Rd man/getProperty-pHSensor-method.Rd man/getProperty-redoxSensor-method.Rd man/getR-Sensor-method.Rd man/getpH-pHSensor-method.Rd man/launchApp.Rd man/ligandSensor-class.Rd man/newSensorFromSpectra-function.Rd man/pH.Rd man/pHSensor-class.Rd man/pLigand.Rd man/plotFractionMax-Sensor-method.Rd man/plotFractionMax-pHSensor-method.Rd man/plotFractionMax-redoxSensor-method.Rd man/plotProperty-Sensor-method.Rd man/plotProperty-pHSensor-method.Rd man/plotProperty-redoxSensor-method.Rd man/plotSpectra-sensorSpectra-method.Rd man/plot_ranges_general.Rd man/plot_ranges_pH.Rd man/plot_ranges_pLigand.Rd man/plot_ranges_redox.Rd man/rangePlot-ligandSensor-method.Rd man/rangePlot-pHSensor-method.Rd man/rangePlot-redoxSensor-method.Rd man/ranges_df-ligandSensor-method.Rd man/ranges_df-pHSensor-method.Rd man/ranges_df-redoxSensor-method.Rd man/ranges_df.Rd man/reScaleToRange-function.Rd man/redoxSensor-class.Rd man/sensorSpectra-class.Rd man/spectraMatrixFromValues-function.Rd
sensorOverlord.Rproj
tests/figs/deps.txt
tests/figs/test-formatspectradata/spectra-adjustment.svg
tests/figs/test-plot-ranges-ph/ranges-multiple-ph.svg
tests/figs/test-plot-ranges-pligand/ranges-multiple-pligand.svg
tests/figs/test-plot-ranges-redox/ranges-multiple.svg
tests/figs/test-plots/fraction-max-generic.svg
tests/figs/test-plots/fraction-max-ph.svg
tests/figs/test-plots/fraction-max-redox.svg
tests/figs/test-plots/plotting-spectra.svg
tests/figs/test-plots/property-generic.svg
tests/figs/test-plots/property-ph.svg
tests/figs/test-plots/property-redox.svg
tests/testthat.R tests/testthat/test_E.R tests/testthat/test_Error_E.R tests/testthat/test_FormatSpectraData.R tests/testthat/test_RofE.R tests/testthat/test_SpectraMatrixFromValues.R tests/testthat/test_create_error_df_pH.R tests/testthat/test_create_error_df_pH_multiple.R tests/testthat/test_create_error_df_pLigand.R tests/testthat/test_create_error_df_pLigand_multiple.R tests/testthat/test_create_error_df_redox.R tests/testthat/test_create_error_df_redox_multiple.R tests/testthat/test_create_ranges_multiple.R tests/testthat/test_error_df.R tests/testthat/test_getAbsError.R tests/testthat/test_getE.R tests/testthat/test_getE_deriv.R tests/testthat/test_getErrorTable.R tests/testthat/test_getFractionMax.R tests/testthat/test_getProperty.R tests/testthat/test_getR.R tests/testthat/test_getpH.R tests/testthat/test_newSensorFromSpectra.R tests/testthat/test_plot_ranges_pH.R tests/testthat/test_plot_ranges_pLigand.R tests/testthat/test_plot_ranges_redox.R tests/testthat/test_plots.R tests/testthat/test_ranges_df.R tests/testthat/testgetDb.R
vignettes/.gitignore
vignettes/SensorOverlord_Walkthrough.Rmd vignettes/accessing-database.Rmd
julianstanley/SensorOverlord documentation built on Aug. 12, 2020, 11:34 p.m.