get_cell_features: Get feature from assay data, colData, or reducedDims at once...

In keshav-motwani/scanalysis: Multi-Sample Visualization and Immune Repertoire Analysis Utilities for Single-Cell Data

Description

Get feature from assay data, colData, or reducedDims at once from main experiment or alternate experiments

Usage

get_cell_features(sce, features, assay, alt_exp = NULL)

Arguments

sce	SingleCellExperiment object
features	names of features desired. It will first check row names of the assay data, then column names of the colData, then column names of each of the reducedDims slots. Only those found will be returned
assay	assay to use (counts, logcounts, etc.)
alt_exp	name of the altExp to use (if any)

Value

data.frame with rows as cells and columns as features

Examples

NULL

keshav-motwani/scanalysis documentation built on Feb. 4, 2021, 2:21 a.m.