dir.hist: Accepts a numeric vector and writes a histogram in EPS format...

In kewiechecki/atacSeqFns: Utility functions for working with ATAC-seq peaks.

Description

Accepts a numeric vector and writes a histogram in EPS format to a specified file. Allows for setting all values greater than a given quantile to the quantile value. Any folders in the path that do not exist are created.

Usage

dir.hist(
  x,
  file,
  breaks = "FD",
  quant = 1,
  path = ".",
  append.date = T,
  col = "gray28",
  border = F,
  main = "",
  xlab = "length (bp)",
  ...
)

Arguments

x	A numeric vector.
breaks	A breaks argument passed to hist.
quant	The maximum quantile to be plotted.
path	The path to the output file.
append.date	Whether to write the output to a directory with today's date.
...	Additional arguments to hist.
filename	The output file name.

See Also

dir.eps, hist

Examples

dir.hist(1:100,"example",path="path/to",quant=.9)
plot(1:5,1:5)
dev.off()

kewiechecki/atacSeqFns documentation built on Sept. 27, 2020, 8:25 a.m.