getOverlapMat: Converts gene-peak table to a logical matrix of associations
In kewiechecki/atacSeqFns: Utility functions for working with ATAC-seq peaks.
Description
Usage
Arguments
Value
See Also
Description
Converts gene-peak table to a logical matrix of associations
Usage
1
getOverlapMat(overlaps)
Arguments
overlaps
A two-column matrix with peak IDs in the first column and gene IDs in the second column. It is intended to be used with the output of getOverlaps.
Value
A logical matrix of gene-peak associations with genes as columns and peaks as rows.
See Also
kewiechecki/atacSeqFns documentation built on Sept. 27, 2020, 8:25 a.m.
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Description Usage Arguments Value See Also
Description
Converts gene-peak table to a logical matrix of associations
Usage
1 | getOverlapMat(overlaps)
|
Arguments
overlaps |
A two-column matrix with peak IDs in the first column and gene IDs in the second column. It is intended to be used with the output of |
Value
A logical matrix of gene-peak associations with genes as columns and peaks as rows.
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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