regMat: Determines a matrix of potential regulatory TFs.
In kewiechecki/atacSeqFns: Utility functions for working with ATAC-seq peaks.
Description
Usage
Arguments
Value
See Also
Description
Determines a matrix of potential regulatory TFs.
Usage
1
regMat(geneToPeak, matches)
Arguments
geneToPeak
A 2-column matrix with the first row corresponding to the row.names of matches and the second giving the Gene ID.
matches
An output from matchMotifs.
Value
A logical matrix with columns corresponding to the motifs in matches and rows corresponding to the genes in geneToPeak.
See Also
kewiechecki/atacSeqFns documentation built on Sept. 27, 2020, 8:25 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value See Also
Description
Determines a matrix of potential regulatory TFs.
Usage
1 | regMat(geneToPeak, matches)
|
Arguments
geneToPeak |
A 2-column matrix with the first row corresponding to the |
matches |
An output from |
Value
A logical matrix with columns corresponding to the motifs in matches and rows corresponding to the genes in geneToPeak.
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.