write_eupath_metadata: Standardize the writing of csv metadata.

In khughitt/EuPathDB: Provides access to pathogen annotation resources available on EuPathDB databases

Standardize the writing of csv metadata.

Description

This function effectively splits the metadata from a single data frame to a set of individual files, one for each data type created.

Usage

write_eupath_metadata(
  metadata,
  webservice,
  file_type = "valid",
  bioc_version = NULL,
  eu_version = NULL,
  overwrite = FALSE,
  output_csv = NULL
)

Arguments

metadata	Set of metadata.
webservice	EupathDB subproject, or the set of all projects named 'eupathdb'.
file_type	Either valid or invalid, defines the final output filenames.
bioc_version	Version of Bioconductor used for this set of metadata.
eu_version	Version of the EuPathDB used for this set of metadata.
build_dir	Directory to which to dump stuff.

Value

List containing the filenames written.

khughitt/EuPathDB documentation built on Nov. 4, 2023, 4:19 a.m.