Description Usage Arguments Value
It is worth noting that sva's ComBat has some of these modifications now.
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dat |
Genomic measure matrix (dimensions probe x sample) |
batch |
Batch covariate (multiple batches allowed) |
mod |
bio factor of interest |
numCovs |
The column numbers of the variables in mod to be treated as continuous variables |
noScale |
do not adjust scale for batch (use default(TRUE) for now) |
prior.plots |
(Optional) TRUE gives prior plots. Used only when noScale is FALSE |
list containing adjusted data(bayesdata), shift adjustments(gamma.star), and scale adjustments(delta.star)
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