artmsMergeEvidenceAndKeys: Merge evidence.txt (or summary.txt) with keys.txt files

In kroganlab/artMS: Analytical R tools for Mass Spectrometry

Merge evidence.txt (or summary.txt) with keys.txt files

Description

Merge the evidence and keys files on the given columns

Usage

artmsMergeEvidenceAndKeys(
  x,
  keys,
  by = c("RawFile"),
  isSummary = FALSE,
  verbose = TRUE
)

Arguments

x	(data.frame or char) The evidence data, either as data.frame or the file name (and path). It also works for the summary.txt file
keys	The keys data, either as a data.frame or file name (and path)
by	(vector) specifying the columns use to merge the evidence and keys. Default: by=c('RawFile')
isSummary	(logical) TRUE or FALSE (default)
verbose	(logical) TRUE (default) shows function messages

Value

(data.frame) with the evidence and keys merged

Examples

evidenceKeys <- artmsMergeEvidenceAndKeys(x = artms_data_ph_evidence,
                                           keys = artms_data_ph_keys)

kroganlab/artMS documentation built on July 7, 2023, 5:35 a.m.