AAMatrix-data: AAMatrix-data
In kullrich/distSTRING: distSTRING calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis
Description
Usage
Format
Value
References
Examples
Description
getAAMatrix() from the alakazam package.
Usage
1
Format
an object of class matrix
Value
score matrix
References
Gupta N, Vander Heiden J, Uduman M, Gadala-Maria D, Yaari G,
Kleinstein S (2015) Change-O: a toolkit for analyzing large-scale B cell
immunoglobulin repertoire sequencing data. Bioinformatics.
31(20), 3356-3358.
Examples
1
data("AAMatrix", package="distSTRING")
kullrich/distSTRING documentation built on Dec. 21, 2021, 8:42 a.m.
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Description Usage Format Value References Examples
Description
getAAMatrix() from the alakazam package.
Usage
1 |
Format
an object of class matrix
Value
score matrix
References
Gupta N, Vander Heiden J, Uduman M, Gadala-Maria D, Yaari G, Kleinstein S (2015) Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data. Bioinformatics. 31(20), 3356-3358.
Examples
1 | data("AAMatrix", package="distSTRING")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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