iupac-data: iupac-data
In kullrich/distSTRING: distSTRING calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis
Description
Usage
Format
References
Examples
Description
Example IUPAC sequences created with angsd
from different house mouse (Mus musculus) sub-populations
from Harr et al. (2016) DNAStringSet.
Usage
1
Format
an object of class DNAStringSet
see XStringSet-class
References
Harr et al. (2016) Genomic resources for wild populations of the
house mouse, Mus musculus and its close relative
Mus spretus. Scientific data. 3(1), 1-14.
Examples
1
data("iupac", package="distSTRING")
kullrich/distSTRING documentation built on Dec. 21, 2021, 8:42 a.m.
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Description Usage Format References Examples
Description
Example IUPAC sequences created with angsd
from different house mouse (Mus musculus) sub-populations
from Harr et al. (2016) DNAStringSet.
Usage
1 |
Format
an object of class DNAStringSet
see XStringSet-class
References
Harr et al. (2016) Genomic resources for wild populations of the house mouse, Mus musculus and its close relative Mus spretus. Scientific data. 3(1), 1-14.
Examples
1 | data("iupac", package="distSTRING")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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