aabin2aastring: aabin2aastring
In kullrich/distSTRING: distSTRING calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
View source: R/aabin2aastring.R
Description
This function converts an ape AAbin into
AAStringSet.
Usage
1
aabin2aastring(aabin)
Arguments
aabin
ape AAbin [mandatory]
Value
An object of class AAStringSet
Author(s)
Kristian K Ullrich
See Also
as.alignment
as.DNAbin.alignment
AAStringSet
Examples
1
2
3
4
data(woodmouse, package="ape")
## convert into AAStringSet
#aabin2aastring(ape::trans(woodmouse, 2))
ape::trans(woodmouse, 2) |> aabin2aastring()
kullrich/distSTRING documentation built on Dec. 21, 2021, 8:42 a.m.
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Description Usage Arguments Value Author(s) See Also Examples
View source: R/aabin2aastring.R
Description
This function converts an ape AAbin into
AAStringSet.
Usage
1 | aabin2aastring(aabin)
|
Arguments
aabin |
|
Value
An object of class AAStringSet
Author(s)
Kristian K Ullrich
See Also
as.alignment
as.DNAbin.alignment
AAStringSet
Examples
1 2 3 4 | data(woodmouse, package="ape")
## convert into AAStringSet
#aabin2aastring(ape::trans(woodmouse, 2))
ape::trans(woodmouse, 2) |> aabin2aastring()
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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