rcpp_pairwiseDeletionAA: rcpp_pairwiseDeletionAA
In kullrich/distSTRING: distSTRING calculates pairwise distances between all sequences of a DNAStringSet or a AAStringSet using a custom score matrix and conducts codon based analysis
Description
Usage
Arguments
Value
Author(s)
Examples
Description
returns number of AA sites used
Usage
1
rcpp_pairwiseDeletionAA(aavector, ncores = 1L)
Arguments
aavector
StringVector
ncores
number of cores
Value
list
Author(s)
Kristian K Ullrich
Examples
1
2
3
4
## load example sequence data
data("hiv", package="distSTRING")
h <- hiv |> cds2aa() |> as.character()
rcpp_pairwiseDeletionAA(aavector=h, ncores=1)
kullrich/distSTRING documentation built on Dec. 21, 2021, 8:42 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
returns number of AA sites used
Usage
1 | rcpp_pairwiseDeletionAA(aavector, ncores = 1L)
|
Arguments
aavector |
StringVector |
ncores |
number of cores |
Value
list
Author(s)
Kristian K Ullrich
Examples
1 2 3 4 | ## load example sequence data
data("hiv", package="distSTRING")
h <- hiv |> cds2aa() |> as.character()
rcpp_pairwiseDeletionAA(aavector=h, ncores=1)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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