supportedTables: Print list of supported (downloadable) tables for a given...
In leekgroup/derfinder: Differential expression analysis of RNA-seq data at base-pair resolution
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
View source: R/supportedTables.R
Description
To be used with getAnnotation: provides a list of
available tables from UCSC for any given genome.
Usage
1
supportedTables(genome)
Arguments
genome
Character string giving the genome of
interest. Available genomes can be seen with
rtracklayer:::ucscGenomes()[,"db"].
Value
prints a list of available tables for genome.
Author(s)
Alyssa Frazee
See Also
Examples
1
2
3
4
5
## Not run:
supportedTables("mm10")
mouse.exons = getAnnotation("mm10","refGene") #refGene appears in printed output of supportedTables("mm10").
## End(Not run)
leekgroup/derfinder documentation built on May 20, 2019, 11:30 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
View source: R/supportedTables.R
Description
To be used with getAnnotation: provides a list of
available tables from UCSC for any given genome.
Usage
1 | supportedTables(genome)
|
Arguments
genome |
Character string giving the genome of
interest. Available genomes can be seen with
|
Value
prints a list of available tables for genome.
Author(s)
Alyssa Frazee
See Also
Examples
1 2 3 4 5 | ## Not run:
supportedTables("mm10")
mouse.exons = getAnnotation("mm10","refGene") #refGene appears in printed output of supportedTables("mm10").
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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