ostrapply: Helper function for read.csv.sql
In leekgroup/derfinder: Differential expression analysis of RNA-seq data at base-pair resolution

Description Usage Arguments Details Value Author(s) References See Also

Same as the strapply or ostrapply functions in gsubfn package, but with tcltk capabilities removed.

1 2	ostrapply(X, pattern, FUN = function(x, ...) x, ignore.case = FALSE, ..., empty = NULL, simplify = FALSE, USE.NAMES = FALSE, combine = c)

`X`	list or (atomic) vector of character strings to be used
`pattern`	character string containing a regular (or character string for `fixed=TRUE` to be matched in the given character vector.
`FUN`	a function, formula, character string, list or proto object to be applied to each element of `X`. See discussion in `gsubfn.`
`ignore.case`	If `TRUE` then case is ignored in the `pattern` argument.
`...`	optional arguments to `gsubfn`.
`empty`	If there is no match to a string return this value.
`simplify`	logical or function. If logical, should the result be simplified to a vector or matrix, as in `sapply` if possible? If function, that function is applied to the result with each component of the result passed as a separate argument. Typically if the form is used it will typically be specified as rbind.
`USE.NAMES`	logical; if `TRUE` and if `X` is character, use `X` as 'names' for the result unless it had names already.
`combine`	combine is a function applied to the components of the result of `FUN`. The default is `"c"`. `"list"` is another common choice. The default may change to be `"list"` in the future.

See strapply in gsubfn. In the tornado package this function should rarely be called on its own. It is an internal process of read.csv.sql, which is an internal process of makeDb.

A list of character strings.

G. Grothendieck

http://cran.r-project.org/web/packages/gsubfn/gsubfn.pdf

makeDb,link{read.csv.sql}

leekgroup/derfinder documentation built on May 20, 2019, 11:30 p.m.