f0: The Prior Predictive Distribution of being EE

Description Usage Arguments Value Author(s) References See Also Examples

View source: R/f0.R

Description

'f0' gives the Prior Predictive Distribution of being EE.

Usage

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f0(Input, AlphaIn, BetaIn, EmpiricalR, NumOfGroups, log)

Arguments

Input

Expression Values.

AlphaIn, BetaIn, EmpiricalR

The parameters estimated from last iteration of EM.

NumOfGroups

How many transcripts within each Ng group.

log

If true, will give the log of the output.

Value

The function will return the prior predictive distribution values of being EE.

Author(s)

Ning Leng

References

Ning Leng, John A. Dawson, James A. Thomson, Victor Ruotti, Anna I. Rissman, Bart M.G. Smits, Jill D. Haag, Michael N. Gould, Ron M. Stewart, and Christina Kendziorski. EBSeq: An empirical Bayes hierarchical model for inference in RNA-seq experiments. Bioinformatics (2013)

See Also

f1

Examples

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#
#f0(matrix(rnorm(100,100,1),ncol=10), .5, .6,
#	matrix(rnorm(100,200,1),ncol=10), 100, TRUE)

lengning/EBSeq documentation built on May 21, 2019, 4:02 a.m.