Files in lgatto/RpepXML
R interface to the pepXML standard
DESCRIPTION
NAMESPACE
NEWS
R/AllGenerics.R
R/MSMSpepXML-class.R
R/SearchHit-class.R
R/SearchResult-class.R
R/SpectrumQuery-class.R
R/functions-parser.R
TODO
inst/doc/RpepXML.Rnw
inst/doc/RpepXML.pdf
inst/doc/Z.cls
inst/extdata/tinySearch.csv
inst/extdata/tinySearch.pepXML
man/MSMSpepXML-class.Rd
man/RpepXML-package.Rd
man/SearchHit-class.Rd
man/SearchResult-class.Rd
man/SpectrumQuery-class.Rd
man/as.matrix.MSMSpepXML.Rd
man/assumedCharge-methods.Rd
man/filterHits-methods.Rd
man/hitRank-methods.Rd
man/ionScore-methods.Rd
man/modifications-methods.Rd
man/nProteins-methods.Rd
man/nSearchHits-methods.Rd
man/nSearchResults-methods.Rd
man/nSpectrumQueries-methods.Rd
man/parseMSMSpepXML.Rd
man/pepFile-methods.Rd
man/pepSequence-methods.Rd
man/precNeutralMass-methods.Rd
man/proteinSummary.Rd
man/proteins-methods.Rd
man/queryIndex-methods.Rd
man/sampleEnzyme-methods.Rd
man/scores-methods.Rd
man/searchDatabase-methods.Rd
man/searchEngine-methods.Rd
man/searchHits-methods.Rd
man/searchId-methods.Rd
man/searchResults-methods.Rd
man/spectrumId-methods.Rd
man/spectrumQueries-methods.Rd
man/startScan-methods.Rd
