R/publication_item.R

In lifs-tools/rmzTab-m: R Package Client for mzTab-M Reference Implementation and Validation API

# mzTab-M reference implementation and validation API.
#
# This is the mzTab-M reference implementation and validation API service.
#
# The version of the OpenAPI document: 2.0.0
# Contact: nils.hoffmann@cebitec.uni-bielefeld.de
# Generated by: https://openapi-generator.tech

#' @docType class
#' @title PublicationItem
#' @description PublicationItem Class
#' @format An \code{R6Class} generator object
#' @field type  character 
#'
#' @field accession  character 
#'
#'
#' @importFrom R6 R6Class
#' @importFrom jsonlite fromJSON toJSON
#' @export
PublicationItem <- R6::R6Class(
  'PublicationItem',
  public = list(
    `type` = NULL,
    `accession` = NULL,
    #' @description Create a PublicationItem
    #' @param type The type of the PublicationItem.
    #' @param accession The type-dependent accession of the PublicationItem.
    #' @param ... local optional variable arguments
    #'
    initialize = function(`type`, `accession`, ...){
      local.optional.var <- list(...)
      if (!missing(`type`)) {
        stopifnot(is.character(`type`), length(`type`) == 1)
        self$`type` <- `type`
      }
      if (!missing(`accession`)) {
        stopifnot(is.character(`accession`), length(`accession`) == 1)
        self$`accession` <- `accession`
      }
    },
    #' @description Serialize to list object suitable for jsonlite
    toJSON = function() {
      PublicationItemObject <- list()
      if (!is.null(self$`type`)) {
        PublicationItemObject[['type']] <-
          rmzTabM::safe_unbox(self$`type`)
      }
      if (!is.null(self$`accession`)) {
        PublicationItemObject[['accession']] <-
          rmzTabM::safe_unbox(self$`accession`)
      }

      PublicationItemObject
    },
    #' @description Deserialize from jsonlite list object
    #' @param PublicationItemJson list object.
    fromJSON = function(PublicationItemJson) {
      PublicationItemObject <- jsonlite::fromJSON(PublicationItemJson)
      if (!is.null(PublicationItemObject$`type`)) {
        self$`type` <- PublicationItemObject$`type`
      }
      if (!is.null(PublicationItemObject$`accession`)) {
        self$`accession` <- PublicationItemObject$`accession`
      }
    },
    #' @description Serialize to JSON string.
    toJSONString = function() {
      jsoncontent <- c(
        if (!is.null(self$`type`)) {
        sprintf(
        '"type":
          "%s"
                ',
        rmzTabM::safe_unbox(self$`type`)
        )},
        if (!is.null(self$`accession`)) {
        sprintf(
        '"accession":
          "%s"
                ',
        rmzTabM::safe_unbox(self$`accession`)
        )}
      )
      jsoncontent <- paste(jsoncontent, collapse = ",")
      paste('{', jsoncontent, '}', sep = "")
    },
    #' @description Deserialize from JSON string
    #' @param PublicationItemJson JSON string
    fromJSONString = function(PublicationItemJson) {
      PublicationItemObject <- jsonlite::fromJSON(PublicationItemJson)
      self$`type` <- PublicationItemObject$`type`
      self$`accession` <- PublicationItemObject$`accession`
      self
    },
    #' @description Serialize to string.
    toString = function() {
      paste(self$`type`, self$`accession`, sep=":")
    },
    #' @description Deserialize from string.
    #' @param PublicationItemString the string representation of a PublicationItem.
    fromString = function(PublicationItemString) {
      PublicationItemList <- splitList(PublicationItemString, separator = ":")
      if (length(PublicationItemList) == 2) {
        self$`type` <- PublicationItemList[[1]]
        self$`accession` <- PublicationItemList[[2]]
      }
      self
    }
  )
)