Files in liliulab/gust
Genes Under Selection In Tumors
.Rbuildignore
DESCRIPTION
NAMESPACE
R/r-functions.plot.R
R/r-functions.selection.R
README.md
data/anno.length.RData
data/annotation.RData
data/cgc.drivers.RData
data/ensembl.mapping.RData
data/fitch.block.1.RData
data/fitch.block.10.RData
data/fitch.block.2.RData
data/fitch.block.3.RData
data/fitch.block.4.RData
data/fitch.block.5.RData
data/fitch.block.6.RData
data/fitch.block.7.RData
data/fitch.block.8.RData
data/fitch.block.9.RData
data/md.rf.RData
data/ref.block.RData
data/refseq_map.RData
data/results.codon_cat.RData
data/results.seq_cat.RData
data/seq.length.RData
data/seq_aa.RData
data/seq_bp.RData
examples/TCGA.ACC.combined.txt
examples/TCGA.ACC.error.txt
examples/TCGA.ACC.fitch.txt
examples/TCGA.ACC.genes.opt.txt
examples/TCGA.ACC.log.txt
examples/TCGA.ACC.mut.cnt.txt
examples/TCGA.ACC.mut.filtered.txt
examples/TCGA.ACC.mut.summary.txt
examples/TCGA.ACC.mutect.somatic.maf.gz
examples/TCGA.ACC.outlier.txt
examples/TCGA.ACC.predictions.txt
examples/TCGA.ACC.reformatted.txt
examples/TCGA.ACC.spatial.txt
examples/TCGA.ACC.symbol_2_cds_id.txt
gust.Rproj
gust.log
man/append.info.Rd
man/check.gene.consv.all.Rd
man/check.gene.mut.Rd
man/compute.fitch.stats.Rd
man/compute.selection.Rd
man/compute.selection.stats.Rd
man/compute.spatial.stats.Rd
man/condense.type.Rd
man/correct.small.sample.bias.Rd
man/find.outliers.Rd
man/find_peaks.Rd
man/get.exp.Rd
man/get.opt.genes.Rd
man/gust.Rd
man/initialize.gust.Rd
man/make.prediction.Rd
man/organize.obs.Rd
man/parse.aggregated.mut.Rd
man/plot.multiple.Rd
man/plot.mut.Rd
man/plot.this.one.Rd
man/prob.Rd
man/prob.joint.Rd
man/prob.joint.indel.Rd
man/reformat.Rd
