compute.selection: Estimate selection coefficients of missense mutations and...
In liliulab/gust: Genes Under Selection In Tumors
View source: R/r-functions.selection.R
compute.selection R Documentation
Estimate selection coefficients of missense mutations and truncating mutations
Description
Estimate selection coefficients of missense mutations and truncating mutations
Usage
compute.selection(obs_exp, joint = FALSE, indel = FALSE)
Arguments
obs_exp:
A data frame with observed and expected counts
joint:
A boolean flag to estimate joint probabilities
indel:
A boolean flag to consider indel jointly with or independently from substitutions
Value
A vector with observed counts, end values and estimated probabilities
liliulab/gust documentation built on Aug. 30, 2022, 1:42 a.m.
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View source: R/r-functions.selection.R
| compute.selection | R Documentation |
Estimate selection coefficients of missense mutations and truncating mutations
Description
Estimate selection coefficients of missense mutations and truncating mutations
Usage
compute.selection(obs_exp, joint = FALSE, indel = FALSE)
Arguments
obs_exp: |
A data frame with observed and expected counts |
joint: |
A boolean flag to estimate joint probabilities |
indel: |
A boolean flag to consider indel jointly with or independently from substitutions |
Value
A vector with observed counts, end values and estimated probabilities
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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