check.gene.consv.all: Retreve fitch rate for each position of a protein.

In liliulab/gust: Genes Under Selection In Tumors

Retreve fitch rate for each position of a protein.

Description

Retreve fitch rate for each position of a protein.

Usage

check.gene.consv.all(id, type = "symbol")

Arguments

id:	An ID indicating the gene.
type:	A flag indicating what type the "id" is. Possible values are "symbol" (gene symbol), "gene.id" (Entrez gene ID), "ensembl.cds" (Ensemble transcript ID), "ensembl.protein" (Ensemble protein ID), and "ensembl.gene" (Ensembl gene ID).

Value

A vector containing fitch rate using 100 vertebrate alignments.

liliulab/gust documentation built on Aug. 30, 2022, 1:42 a.m.