Files in lingxuez/SOUP

Semi-soft Clustering of Single Cell Data

R/SOUP.R R/SOUPcv.R R/SOUPlineage.R R/SOUPtime.R R/data.R R/deconvSingle.R R/descend.R R/g_model.R R/geneSelect.R R/utils_plot.R R/utils_plot_lineage.R README.md man/DESCEND.Rd man/DESCEND.control.Rd man/DESCENDselect.Rd man/SOUP.Rd man/SPCAselect.Rd man/camp.Rd man/cv.error.SOUP.Rd man/cvSOUP.Rd man/deconvG.Rd man/deconvSingle.Rd man/findHVG.Rd man/findPure.Rd man/getCenters.Rd man/getClusterLineages.Rd man/getClusterOrder.Rd man/getDescendants.Rd man/getEstimates.Rd man/getLineageCurves.Rd man/getLineageTime.Rd man/getMajorMatrix.Rd man/getPermute.Rd man/getPval.Rd man/getSimilarity.Rd man/getTheta.Rd man/getTimeline.Rd man/heatmapKseq.Rd man/plotContTable.Rd man/plotGeneTimeline.Rd man/plotLineageCurves.Rd man/plotMultipleGeneTimeline.Rd man/predictTheta.Rd man/projMembership.Rd man/runDescend.Rd man/scaleRowSums.Rd man/selectGenes.Rd man/zeisel.Rd vignettes/SOUP-vignette.Rmd vignettes/SOUP-vignette.pdf