plotContTable: Visualize contingency table
In lingxuez/SOUP: Semi-soft Clustering of Single Cell Data
Description
Usage
Arguments
Value
Description
Visualize contingency table
Usage
1
2
plotContTable(est_label, true_label, short.names = NULL,
xlab = "Reference")
Arguments
est_label
Estimated cluster assignments, a vector of characters or factors
true_label
The true cell types, a vector of characters or factors
short.names
(optional) If the true cell type names are too long,
you can supply abbreviated names to save space in visualizations
xlab
(optional) The x-axis label; default is "Reference"
Value
A ggplot object.
lingxuez/SOUP documentation built on May 28, 2019, 3:38 p.m.
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Description Usage Arguments Value
Description
Visualize contingency table
Usage
1 2 | plotContTable(est_label, true_label, short.names = NULL,
xlab = "Reference")
|
Arguments
est_label |
Estimated cluster assignments, a vector of characters or factors |
true_label |
The true cell types, a vector of characters or factors |
short.names |
(optional) If the true cell type names are too long, you can supply abbreviated names to save space in visualizations |
xlab |
(optional) The x-axis label; default is "Reference" |
Value
A ggplot object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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