plotMultipleGeneTimeline: Plot multiple gene expressions along trajectory

Description Usage Arguments Value

Description

Expression levels of multiple genes along trajectory, arranged on a grid of plots.

Usage

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plotMultipleGeneTimeline(expr, genelist, timeline,
  x.title = "SOUP trajectory", y.title = "Expression", nrow = NULL,
  ncol = NULL)

Arguments

expr

The cell-by-gene expression matrix to be visualized

genelist

A list of genes to be visualized; must be among the columns of expr

timeline

Timepoints for all cells, a vector

x.title

(optional) Label of x-axis

y.title

(optional) Label of y-axis

nrow

(optional) number of rows in the plot grid.

ncol

(optional) number of cols in the plot grid.

Value

A ggplot object


lingxuez/SOUP documentation built on May 28, 2019, 3:38 p.m.