test.2sptree: testing if two species trees are significantly different
In lliu1871/phybase: Basic functions for phylogenetic analysis
test.2sptree R Documentation
testing if two species trees are significantly different
Description
This function is testing if two species trees are significantly different from each other.
Usage
test.2sptree(path_mpest="mpest", sptree1, sptree2, genetreefile, ngenetree, nbootstrap)
Arguments
path_mpest
the full path of the mp-est binary
sptree1
the species tree 1
sptree2
the species tree 2
genetreefile
the gene tree file
ngenetree
the number of gene trees
nbootstrap
the number of bootstrap replicates
Author(s)
Liang Liu lliu@uga.edu
lliu1871/phybase documentation built on April 21, 2024, 3:16 a.m.
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| test.2sptree | R Documentation |
testing if two species trees are significantly different
Description
This function is testing if two species trees are significantly different from each other.
Usage
test.2sptree(path_mpest="mpest", sptree1, sptree2, genetreefile, ngenetree, nbootstrap)
Arguments
path_mpest |
the full path of the mp-est binary |
sptree1 |
the species tree 1 |
sptree2 |
the species tree 2 |
genetreefile |
the gene tree file |
ngenetree |
the number of gene trees |
nbootstrap |
the number of bootstrap replicates |
Author(s)
Liang Liu lliu@uga.edu
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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