condPerGenes: Conditional probability by genes per pathway

In llrs/GSEAdv: Analyze Gene Sets Collections Properites

Description

Calculates the probability of having a number of pathways per gene given the number of genes in a pathway

Usage

condPerGenes(object, genesPerPathway)

## S4 method for signature 'GeneSetCollection,missing'
condPerGenes(object)

## S4 method for signature 'GeneSetCollection,numeric'
condPerGenes(object, genesPerPathway)

Arguments

object	A GeneSetCollection
genesPerPathway	A numeric vector of the number of genes per pathways.

Value

A matrix with the probabilities

Methods (by class)

• object = GeneSetCollection,genesPerPathway = missing: Check the conditional probability given the number of genes

• object = GeneSetCollection,genesPerPathway = numeric: Check the conditional probability given the number of genes

Author(s)

Llu<c3><ad>s Revilla Sancho

See Also

condPerPathways

Examples

condPerGenes(Info)
condPerGenes(Info, 2)

llrs/GSEAdv documentation built on May 29, 2019, 6 p.m.