isolation: Checks isolated GeneSets

In llrs/GSEAdv: Analyze Gene Sets Collections Properites

Description

Checks if any gene set has all the genes only present in that gene set.

Usage

isolation(object)

## S4 method for signature 'GeneSetCollection'
isolation(object)

Arguments

object

A GeneSetCollection

Value

TRUE if there is a gene set where all its genes are only present on this gene set.

Methods (by class)

• GeneSetCollection: Checks if a gene set is isolated.

See Also

independence

Examples

fl <- system.file("extdata", "Broad.xml", package = "GSEABase")
gss <- getBroadSets(fl)
# Warning
isolation(gss)

llrs/GSEAdv documentation built on May 29, 2019, 6 p.m.