Files in llrs/GSEAdv
Analyze Gene Sets Collections Properites
.Rbuildignore
.github/CONTRIBUTING.md
.github/ISSUE_TEMPLATE.md
.gitignore
.travis.yml
CODE_OF_CONDUCT.md
DESCRIPTION
GSEAdv.Rproj
LICENSE
NAMESPACE
NEWS.md
R/AllGenerics.R
R/GSEAdv-package.R
R/add.R
R/adjacency.R
R/as_GeneSetCollection.R
R/calc-nPathways.R
R/check-GSC.R
R/completness.R
R/cond.R
R/distr.R
R/duplicated.R
R/edges.R
R/estimate.R
R/estimate_sizes.R
R/expand.R
R/fromSizeGenes.R
R/fromSizeGenes_sizePathways.R
R/fromSizePathways.R
R/gene.R
R/genesPerGene.R
R/genesPerPathway.R
R/keep.R
R/modify.R
R/n_functions.R
R/nested.R
R/pathway.R
R/pathwaysPerGene.R
R/remove.R
R/simulate2GSC.R
R/simulateGSC.R
R/sizes.R
R/sizesPer.R
R/summary.R
R/utilities.R
R/zzz.R
README.Rmd
README.md
appveyor.yml
codecov.yml
data/Info.rda
data/genesKegg.rda
man/GSEAdv.Rd
man/IC.Rd
man/Info.Rd
man/add.Rd
man/adjacency.Rd
man/as.GeneSetCollection.Rd
man/calc.max.nGenes.Rd
man/calc.min.nGenes.Rd
man/calc.nPathways.Rd
man/check.Rd
man/combnGPP.Rd
man/combnPPG.Rd
man/compare.Rd
man/completness.Rd
man/condPerGenes.Rd
man/condPerPathways.Rd
man/distrGenes.Rd
man/distrPathways.Rd
man/double.factorial.Rd
man/drop.Rd
man/dropRel.Rd
man/duplicatedGenes.Rd
man/duplicatedPathways.Rd
man/edges.Rd
man/equalize.Rd
man/estimate.Rd
man/estimate.nGenes.Rd
man/estimate.nPathways.Rd
man/figures/README-gpp-1.png
man/figures/README-ppg-1.png
man/figures/README-unnamed-chunk-3-1.png
man/figures/README-unnamed-chunk-4-1.png
man/figures/README-unnamed-chunk-5-1.png
man/figures/README-unnamed-chunk-6-1.png
man/fromGPP.Rd
man/fromGPP_nGenes.Rd
man/fromPPG.Rd
man/fromPPG_GPP.Rd
man/fromPPG_nPathways.Rd
man/fromSizeGenes.Rd
man/fromSizeGenes_sizePathways.Rd
man/fromSizePathways.Rd
man/gene.Rd
man/genesKegg.Rd
man/genesPerGene.Rd
man/genesPerPathway.Rd
man/h_index.Rd
man/helper_sizes.Rd
man/independence.Rd
man/inverseList.Rd
man/isolation.Rd
man/maxIC.Rd
man/modify.Rd
man/nGenes.Rd
man/nPathways.Rd
man/names_vec.Rd
man/nested.Rd
man/pathway.Rd
man/pathwaysPerGene.Rd
man/sizeGenes.Rd
man/sizePathways.Rd
man/sizesPerGene.Rd
man/sizesPerPathway.Rd
man/summary.Rd
tests/README.md
tests/spelling.R
tests/testthat.R
tests/testthat/helper_data.R
tests/testthat/test-adjacency.R
tests/testthat/test-distr.R
tests/testthat/test-edges.R
tests/testthat/test-estimate.R
tests/testthat/test_add.R
tests/testthat/test_asGeneSetCollection.R
tests/testthat/test_calcnPathways.R
tests/testthat/test_check.R
tests/testthat/test_completness.R
tests/testthat/test_condPer.R
tests/testthat/test_drop.R
tests/testthat/test_duplicates.R
tests/testthat/test_estimate_sizes.R
tests/testthat/test_fromSizeGenes.R
tests/testthat/test_fromSizeGenes_sizePathways.R
tests/testthat/test_fromSizePathways.R
tests/testthat/test_gene.R
tests/testthat/test_genesPerGene.R
tests/testthat/test_genesPerPathway.R
tests/testthat/test_keep.R
tests/testthat/test_keeps.R
tests/testthat/test_modify.R
tests/testthat/test_nested.R
tests/testthat/test_pathway.R
tests/testthat/test_simulations.R
tests/testthat/test_sizes.R
tests/testthat/test_sizesPer.R
tests/testthat/test_summary.R
tests/testthat/test_utilities.R
vignettes/GSEAdv.jpg
vignettes/vignette.Rmd
vignettes/vignette_describe.Rmd
vignettes/vignette_evaluate.Rmd
vignettes/vignette_simulate.Rmd
