pathwaysPerGene: Pathways per gene

In llrs/GSEAdv: Analyze Gene Sets Collections Properites

Description

Calculates the pathways per gene of a GeneSetCollection. In set theory it is called cardinality.

Usage

pathwaysPerGene(object, genes)

## S4 method for signature 'GeneSetCollection,missing'
pathwaysPerGene(object)

## S4 method for signature 'GeneSetCollection,character'
pathwaysPerGene(object, genes)

Arguments

object	A GeneSetCollection object.
genes	A character vector of genes.

Value

A numeric vector of pathways per genes.

Methods (by class)

• object = GeneSetCollection,genes = missing: Pathways per gene in all the GeneSetCollection

• object = GeneSetCollection,genes = character: Pathways per gene in the GeneSetCollection for those genes.

Author(s)

Llu<c3><ad>s Revilla

See Also

genesPerPathway

Examples

pathwaysPerGene(Info)
pathwaysPerGene(Info, "10")

llrs/GSEAdv documentation built on May 29, 2019, 6 p.m.