nested: Pathways included in other pathways

In llrs/GSEAdv: Analyze Gene Sets Collections Properites

Description

Check if all the genes of a pathway are inside another pathway.

Usage

nested(object)

## S4 method for signature 'GeneSetCollection'
nested(object)

Arguments

object

A GeneSetCollection

Value

A matrix with 1 if they are included and 0 if not. 1 means that the pathways on the rows are in the ones of the columns

Methods (by class)

• GeneSetCollection: Check if pathways are included in another pathway.

See Also

compare

Examples

nested(Info)

llrs/GSEAdv documentation built on May 29, 2019, 6 p.m.