lpantano/DEGreport: Report of DEG analysis

Creation of a HTML report of differential expression analyses of count data. It integrates some of the code mentioned in DESeq2 and edgeR vignettes, and report a ranked list of genes according to the fold changes mean and variability for each selected gene.

Getting started

Package details

Bioconductor views DifferentialExpression GeneExpression ImmunoOncology RNASeq ReportWriting Visualization
MaintainerLorena Pantano <[email protected]>
LicenseMIT + file LICENSE
Version1.21.2
URL http://lpantano.github.io/DEGreport/
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("lpantano/DEGreport")
lpantano/DEGreport documentation built on Sept. 16, 2019, 1:34 a.m.