add_interlayer_links | Generate Node aligned Interlayer Edges for a Multilayer... |
BuildSupraAdjacencyMatrixFromExtendedEdgelist | Build supra-adjacency matrix from edge lists |
calc_centrality | Compute Centrality for a Weighted/Unweighted Network |
calc_incoherence | Calculate the incoherence index of a food web |
calc_interaction_intensity | Calculates the interaction intensity of a food web using the... |
calc_interaction_intensity2 | Calculates the interaction intensity of a food web using... |
calc_modularity | Calculation of Modularity for a List of igraph Objects |
calc_modularity_swness_zscore | Calculation of Modularity and Small-world-ness z-scores |
calc_QSS | Calc the Quasi Sign Stability measure for antagonistic... |
calc_QSS_extinction_dif | Calculates the QSS difference between the full network and... |
calc_QSS_extinction_dif_grp | Calculates the QSS difference between the full network and... |
calc_QSS_extinctions_seq | Calculates the QSS for an extinction sequence |
calc_quantitative_connectance | Calculates the quantitative connectance, and the effective... |
calc_svd_entropy | Singular Value Decomposition (SVD) Entropy and Rank... |
calc_svd_entropy_importance | Singular Value Decomposition (SVD) Analysis of Networks |
calc_swness_zscore | Calculation Small-world-ness z-scores |
calc_topological_indices | Calculate topological indices for ecological networks. The... |
calc_topological_roles | Calc topological roles among network communities/modules |
calc_weighted_topological_indices | Function to calculate weighted network indices |
classify_topological_roles | Classify and plot topological roles |
convert_to_intra_format | Convert a List of igraph Objects to Intralayer Edge Format |
convert_to_supra_adjacency | Convert Multilayer Network to Supra-Adjacency Matrix (SAM) |
curve_ball | Curbe ball algorithm to generate random networks with given... |
fromGLVadjToIgraph | From Generalized Lotka Volterra adjacency matrix to igraph... |
fromIgraphToMgraph | From multiple igraph objects to 'mgraph' |
generate_er_basal | Generate directed Erdos-Renyi random networks with at least 1... |
generate_niche | Generate Niche Model Food Web(s) |
generate_shuffled_seq | Generate a Sequence of Shuffled Networks and Track Metric... |
generate_shuffled_seq_tol | Generate a Sequence of Shuffled Networks and Track... |
metadata | Metadata for 'netData' |
netData | Compilation of Ecological Networks (food webs) in igraph... |
plot_troph_level | Plot ecological network organized by trophic level, with node... |
plot_troph_level_ggplot | Plot an Ecological Network Organized by Trophic Level |
readMultiplex | Read ecological multiplex networks using different files for... |
readNetwork | Read ecological networks in CSV or tab separated file format... |
run_infomap | Interface R and igraph with Infomap (external binary) |
run_infomap_multi | Run Infomap on Multilayer Networks with Intralayer Links |
shuffle_network_deg | Degree-Preserving Network Shuffling via Edge Swaps |
shuffle_network_ws | Random Network Rewiring Without Preserving Degree... |
toGLVadjMat | From multiple interaction object 'mgraph'to GLV adjacency... |
write_multilayer_network | Write a Multilayer Network to a File in Infomap-Compatible... |
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